Is there something us users can do to help this issue? If I launched my full node and started validating transactions would this help, not help this issue? This seems serious.
If you are using bitcoin core older than 0.9 or older, you should upgrade to 0.10 or newer.
If you have contacts with miners still mining v2 blocks or not rejecting v2 blocks, you could ask them to upgrade as well.
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And WHAT has happened to all the transactions that occurred during that time frame? Do they all get recorded in new blocks? Block 363737 only has some 166 trx listed.
Maybe other tools are better than blockchain.info?
Is there a way to see recently orphaned blocks?
You could use blocktrail.com or btc.blockr.io. They are correctly rejecting v2 blocks AFAIK.