I hold EOS, bought through the crowdsale, in 2 separate metamask wallets. Wallet 1 is registered for the EOS it holds, wallet 2 is not registered nor claimed. If I were to claim the EOS in wallet 2 and send it to wallet 1 would that mean that EOS is now registered too?
Not sure what you mean by registering EOS. You register an address not the tokens. Then you can send as much EOS to that address as you want. Right before the official EOS blockchain is released, they will take a snapshot of all the registered addresses and the amount of EOS it holds. If you have multiple addresses and don't want to use one, then register both of the addresses. As long as your EOS is in addresses that are registered, you should be fine.